Basically, it goes something like this:
Use the brakes " firmly " ( to prevent glazing ).
No panicstops ( if you can avoid it ).
Allow brakes to cool between stops.
These rules apply to the first 100-200 miles driving with new rotors/pads.
Once in a while when I'm out cruising, with no traffic around, I like to make 2-3 very hard stops, just to minimize any glazing effect my wifes driving may be causing.