Update.
I inspected the caps and rotors, slightly corroded. Cleaned them and replaced. I removed the Electronic Throttle Assembly and took it to my friend who also rebuilt my wiring harness to inspect.. he could find nothing wrong with it electronically. I re-installed it and now the car has only 1/2 throttle response and still misses.
After building a code reader/clearer I found 11 codes (most from bad harness, I assume). I cleared all of them but only two come back now.
Pin 7 (EA module) = Code 14 (Closed throttle position contact switch (S29/3) )
Pin 6 (ASR module) = Code 30 (CAN data line to EA/CC/ISC module (N4/1) )
Any ideas? This thread is similar to my problem..
http://www.500e.com/forums/showthre...&highlight=mode
Ideas?